Protein Bagels with Cottage Cheese

Freshly baked Protein Bagels with Cottage Cheese cooling on a wooden board, topped with creamy cheese and chives. Save to Pinterest
Freshly baked Protein Bagels with Cottage Cheese cooling on a wooden board, topped with creamy cheese and chives. | whiskandwok.com

These soft, chewy bagels combine Greek yogurt and cottage cheese in the dough for a high-protein twist on the classic breakfast favorite. Each bagel delivers 17g of protein while staying light at only 205 calories. The whole wheat flour adds fiber, while whey protein powder boosts the nutritional profile without compromising texture.

Baking at 375°F creates a golden exterior with tender insides. The finished bagels get crowned with creamy cottage cheese, fresh chives, and black pepper. The preparation is straightforward: mix, knead briefly, shape into rings, and bake. No boiling required like traditional bagels.

Customize with your favorite toppings—sesame seeds, poppy seeds, or everything bagel seasoning before baking. Serve plain or add smoked salmon and sliced tomatoes for a complete meal. Perfect for meal prep and stays fresh for days.

The first time I told my gym friends I was making bagels with cottage cheese, they looked at me like I had completely lost my mind. But then they tasted them and suddenly those skeptical expressions turned into requests for the recipe. These became my Sunday morning ritual throughout training season when I needed something that felt indulgent but actually fueled me properly.

I remember bringing a batch to a brunch where everyone assumed they were traditional New York style bagels. The moment I revealed the secret ingredient, the table went completely silent. Now my sister refuses to eat any other bagels and texts me every time she makes a fresh batch for her kids before school.

Ingredients

  • 1 cup low-fat cottage cheese: This creates the moist tender crumb while boosting protein content
  • 1 cup plain Greek yogurt: Adds tanginess and helps bind the dough without needing water
  • 2 cups whole wheat flour: Gives structure and that classic bagel chewiness we all love
  • 2 tbsp unflavored whey protein powder: Extra protein punch without altering the taste
  • 2 tsp baking powder: The leavening agent that makes these puff up beautifully
  • ½ tsp fine sea salt: Enhances all the flavors and balances the dairy tang
  • 1 egg: Beaten and brushed on tops for that gorgeous golden shine
  • Additional cottage cheese for topping: Makes each bagel extra creamy and protein-rich
  • Fresh chives: Bright onion flavor that cuts through the richness
  • Freshly ground black pepper: Essential savory finish that brings everything together

Instructions

Preheat and Prep:
Heat your oven to 375°F and line a baking sheet with parchment paper so nothing sticks
Mix the Dairy Base:
Combine cottage cheese and Greek yogurt in a large bowl until completely smooth with no lumps remaining
Combine Dry Ingredients:
Add flour, protein powder, baking powder, and salt to the dairy mixture and stir until a shaggy dough forms
Work the Dough:
Turn onto a floured surface and knead gently for just 2 to 3 minutes until it comes together
Shape Your Bagels:
Divide into 4 equal pieces, roll each into a ball, poke a hole through the center, and stretch into bagel shapes
Add the Shine:
Place on prepared baking sheet, brush tops with beaten egg, and bake 23 to 25 minutes until golden brown
Finish and Serve:
Let cool slightly then top generously with cottage cheese, chives, and fresh black pepper
A close-up view of golden Protein Bagels with Cottage Cheese, served on a plate with cracked black pepper. Save to Pinterest
A close-up view of golden Protein Bagels with Cottage Cheese, served on a plate with cracked black pepper. | whiskandwok.com

My dad who swears he hates healthy food versions of classics ate three of these in one sitting. He kept saying they reminded him of the bagel shop he visited every Saturday morning before work. Now he asks me to make double batches whenever I visit home.

Getting the Perfect Shape

I used to struggle with getting the holes even until I learned to gently rotate the dough on my finger like a spinning motion. The key is working quickly while the dough is still cold from the refrigerator. If your bagels look imperfect do not worry because they will bake into beautiful shapes regardless.

Flavor Variations

Sometimes I add Everything Bagel seasoning to the tops before baking for that classic deli flavor everyone recognizes. You can also mix herbs directly into the dough or swap the chives for fresh dill if you prefer something more subtle. The basic dough is incredibly forgiving and adapts well to whatever flavors you are craving.

Storage and Reheating

These bagels keep beautifully in the refrigerator for up to five days or freeze them for up to three months wrapped individually. To reheat, simply toast them cut side up until warmed through and slightly crispy on the edges.

  • Slice bagels before freezing so you can toast them directly from frozen
  • Store the topping separately if you plan to meal prep for the week
  • A quick 30 second zap in the microwave softens them perfectly if you prefer softer texture
Warm Protein Bagels with Cottage Cheese arranged on a rustic tray, ready for a high-protein breakfast spread. Save to Pinterest
Warm Protein Bagels with Cottage Cheese arranged on a rustic tray, ready for a high-protein breakfast spread. | whiskandwok.com

There is something deeply satisfying about watching skeptical friends take that first bite and seeing their eyes light up with surprise. These bagels have become my go to for proving that healthy food can be absolutely delicious.

Recipe FAQs

Yes, substitute the protein powder with additional whole wheat or all-purpose flour. The bagels will have slightly less protein per serving but still maintain good texture and flavor.

No boiling required. The Greek yogurt and cottage cheese in the dough create the characteristic chewy texture without the water-bath step. Simply shape and bake directly.

Store cooled bagels in an airtight container at room temperature for up to 2 days, or refrigerate for up to 5 days. Freeze individually wrapped for up to 3 months and thaw overnight.

Substitute whole wheat flour with all-purpose flour for a lighter, softer bagel. For gluten-free options, use a 1:1 gluten-free baking blend, though texture may vary slightly.

The combination of Greek yogurt, cottage cheese in the dough, and whey protein powder provides 17g of protein per bagel. This makes them significantly more protein-dense than traditional bagels.

Yes, prepare the dough, shape into balls, and refrigerate overnight. Let come to room temperature for 10 minutes before shaping into bagels and baking.

Protein Bagels with Cottage Cheese

Soft, protein-rich bagels topped with cottage cheese for a satisfying breakfast.

Prep 20m
Cook 25m
Total 45m
Servings 4
Difficulty Easy

Ingredients

Bagel Dough

  • 1 cup (240 g) low-fat cottage cheese
  • 1 cup (120 g) plain Greek yogurt
  • 2 cups (240 g) whole wheat flour
  • 2 tbsp (16 g) unflavored whey protein powder
  • 2 tsp (8 g) baking powder
  • ½ tsp (3 g) fine sea salt
  • 1 large egg, beaten for egg wash

Topping

  • 1 cup (240 g) low-fat cottage cheese
  • 2 tbsp chopped fresh chives
  • Freshly ground black pepper to taste

Instructions

1
Prepare Oven and Baking Surface: Preheat oven to 375°F. Line a baking sheet with parchment paper.
2
Mix Wet Base: Combine cottage cheese and Greek yogurt in a large bowl. Mix until completely smooth and homogeneous.
3
Incorporate Dry Ingredients: Add whole wheat flour, whey protein powder, baking powder, and salt to the wet mixture. Stir until a shaggy, sticky dough forms.
4
Knead Dough: Turn dough onto a lightly floured surface. Knead gently for 2-3 minutes until just combined. Avoid overworking to maintain texture.
5
Shape Bagels: Divide dough into 4 equal portions. Roll each into a smooth ball, press a thumb through the center, and gently stretch into an even ring shape.
6
Apply Egg Wash: Place shaped bagels on the prepared baking sheet. Brush tops generously with beaten egg for a golden, shiny finish.
7
Bake: Bake for 23-25 minutes until deeply golden brown and firm to the touch. Rotate pan halfway through for even browning.
8
Add Toppings: Let cool for 5 minutes. Spread cottage cheese generously over each bagel. Garnish with fresh chives and cracked black pepper.
Additional Information

Equipment Needed

  • Large mixing bowl
  • Baking sheet
  • Parchment paper
  • Pastry brush
  • Measuring cups and spoons

Nutrition (Per Serving)

Calories 205
Protein 17g
Carbs 27g
Fat 3g

Allergy Information

  • Dairy products (cottage cheese, Greek yogurt)
  • Eggs
  • Wheat and gluten
Monica Zhou

Passionate home cook sharing easy, wholesome recipes and practical tips for everyday cooking.